|“||The PURIFY CHAMBER project got this far not just because PROF. KRANE was here. We got here because we all worked as a team. Having come this far, it would be wrong to stop now. Our pride as scientists is on the line. Let's finish the project as one!||”|
–Lily, Pokémon XD: Gale of Darkness
Lily is first seen where she tells Michael to find Jovi and bring her back home. Michael eventually brings Jovi back and Lily tells her son that Professor Krane wants to see him. Soon, Professor Krane is kidnapped by Cipher, but Lily isn't about to give up on creating the purification chamber. She tells Michael to get the machine parts from Gateon Port and askes Jovi to tag along him.