Chronologically, this arc takes place two years after the Emerald arc.
- Main article: Pokémon Adventures: Volume 41
Gold faces Arceus. Gold faces the Elite Four at the Pokéathlon. Silver arrives at the Whirl Islands looking for Lance. There, he encounters Clair, who is also looking for Lance. Carr is revealed to have taken over Team Rocket. Crystal arrives in the Safari Zone and encounters Silver. Gold meets Morty and asks for his help to find Lance. While making their way to Ecruteak, Silver and Crystal are attacked by Ariana.
- Main article: Pokémon Adventures: Volume 42
Lance, Pryce, and Giovanni battle and defeat the Creation trio. Pryce was chosen by Celebi to exit the Ilex Forest Shrine and participate in the battle. Gold battles Arceus alone. Gold's Togepi evolves into Togetic, and then Togekiss. Cynthia meets Palmer, and he reveals that a Regigigas is in his possession.
- Main article: Pokémon Adventures: Volume 43
Note: This volume only continued the HG/SS arc in the Chuang Yi translation of the manga. In the Viz media translation, the whole HG/SS story arc was collected into two volumes, the second being longer because of this.
|Pokémon: Diamond & Pearl, Platinum and HeartGold & SoulSilver|
HeartGold & SoulSilver arc
|Other arcs: RGB & YL · G&S & CR · R&S, FRLG & EM · B&W & B2W2 · X&Y & ORAS · S&M & USUM|